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Novel Bat Alphacoronaviruses in Southern China Support Chinese Horseshoe Bats as an Important Reservoir for Potential Novel Coronaviruses

Identifieur interne : 000B08 ( Main/Exploration ); précédent : 000B07; suivant : 000B09

Novel Bat Alphacoronaviruses in Southern China Support Chinese Horseshoe Bats as an Important Reservoir for Potential Novel Coronaviruses

Auteurs : Susanna K. P. Lau [République populaire de Chine] ; Antonio C. P. Wong ; Libao Zhang ; Hayes K. H. Luk ; Jamie S. L. Kwok ; Syed S. Ahmed ; Jian-Piao Cai ; Pyrear S. H. Zhao ; Jade L. L. Teng [République populaire de Chine] ; Stephen K. W. Tsui ; Kwok-Yung Yuen [République populaire de Chine] ; Patrick C. Y. Woo [République populaire de Chine]

Source :

RBID : PMC:6563315

Abstract

While bats are increasingly recognized as a source of coronavirus epidemics, the diversity and emergence potential of bat coronaviruses remains to be fully understood. Among 1779 bat samples collected in China, diverse coronaviruses were detected in 32 samples from five different bat species by RT-PCR. Two novel alphacoronaviruses, Rhinolophus sinicus bat coronavirus HKU32 (Rs-BatCoV HKU32) and Tylonycteris robustula bat coronavirus HKU33 (Tr-BatCoV HKU33), were discovered from Chinese horseshoe bats in Hong Kong and greater bamboo bats in Guizhou Province, respectively. Genome analyses showed that Rs-BatCoV HKU32 is closely related to BatCoV HKU10 and related viruses from diverse bat families, whereas Tr-BatCoV HKU33 is closely related to BtNv-AlphaCoV and similar viruses exclusively from bats of Vespertilionidae family. The close relatedness of Rs-BatCoV HKU32 to BatCoV HKU10 which was also detected in Pomona roundleaf bats from the same country park suggests that these viruses may have the tendency of infecting genetically distant bat populations of close geographical proximity with subsequent genetic divergence. Moreover, the presence of SARSr-CoV ORF7a-like protein in Rs-BatCoV HKU32 suggests a common evolutionary origin of this accessory protein with SARS-CoV, also from Chinese horseshoe bats, an apparent reservoir for coronavirus epidemics. The emergence potential of Rs-BatCoV HKU32 should be explored.


Url:
DOI: 10.3390/v11050423
PubMed: 31067830
PubMed Central: 6563315


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

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<affiliation>
<nlm:aff id="af6-viruses-11-00423">School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, Hong Kong, China;
<email>jamie_slk@link.cuhk.edu.hk</email>
(J.S.L.K.);
<email>kwtsui@cuhk.edu.hk</email>
(S.K.W.T.)</nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Ahmed, Syed S" sort="Ahmed, Syed S" uniqKey="Ahmed S" first="Syed S." last="Ahmed">Syed S. Ahmed</name>
<affiliation>
<nlm:aff id="af1-viruses-11-00423">Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China;
<email>skplau@hku.hk</email>
(S.K.P.L.);
<email>antonwcp@connect.hku.hk</email>
(A.C.P.W);
<email>hkhluk@hku.hk</email>
(H.K.H.L.);
<email>shakeel87@gmail.com</email>
(S.S.A.);
<email>caijuice@hku.hk</email>
(J.-P.C.);
<email>pyrear@126.com</email>
(P.S.H.Z.);
<email>llteng@hku.hk</email>
(J.L.L.T.)</nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Cai, Jian Piao" sort="Cai, Jian Piao" uniqKey="Cai J" first="Jian-Piao" last="Cai">Jian-Piao Cai</name>
<affiliation>
<nlm:aff id="af1-viruses-11-00423">Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China;
<email>skplau@hku.hk</email>
(S.K.P.L.);
<email>antonwcp@connect.hku.hk</email>
(A.C.P.W);
<email>hkhluk@hku.hk</email>
(H.K.H.L.);
<email>shakeel87@gmail.com</email>
(S.S.A.);
<email>caijuice@hku.hk</email>
(J.-P.C.);
<email>pyrear@126.com</email>
(P.S.H.Z.);
<email>llteng@hku.hk</email>
(J.L.L.T.)</nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Zhao, Pyrear S H" sort="Zhao, Pyrear S H" uniqKey="Zhao P" first="Pyrear S. H." last="Zhao">Pyrear S. H. Zhao</name>
<affiliation>
<nlm:aff id="af1-viruses-11-00423">Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China;
<email>skplau@hku.hk</email>
(S.K.P.L.);
<email>antonwcp@connect.hku.hk</email>
(A.C.P.W);
<email>hkhluk@hku.hk</email>
(H.K.H.L.);
<email>shakeel87@gmail.com</email>
(S.S.A.);
<email>caijuice@hku.hk</email>
(J.-P.C.);
<email>pyrear@126.com</email>
(P.S.H.Z.);
<email>llteng@hku.hk</email>
(J.L.L.T.)</nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Teng, Jade L L" sort="Teng, Jade L L" uniqKey="Teng J" first="Jade L. L." last="Teng">Jade L. L. Teng</name>
<affiliation>
<nlm:aff id="af1-viruses-11-00423">Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China;
<email>skplau@hku.hk</email>
(S.K.P.L.);
<email>antonwcp@connect.hku.hk</email>
(A.C.P.W);
<email>hkhluk@hku.hk</email>
(H.K.H.L.);
<email>shakeel87@gmail.com</email>
(S.S.A.);
<email>caijuice@hku.hk</email>
(J.-P.C.);
<email>pyrear@126.com</email>
(P.S.H.Z.);
<email>llteng@hku.hk</email>
(J.L.L.T.)</nlm:aff>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="af2-viruses-11-00423">State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong, China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong</wicri:regionArea>
<wicri:noRegion>Hong Kong</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="af3-viruses-11-00423">Carol Yu Centre for Infection, The University of Hong Kong, Pokfulam, Hong Kong, China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Carol Yu Centre for Infection, The University of Hong Kong, Pokfulam, Hong Kong</wicri:regionArea>
<wicri:noRegion>Hong Kong</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Tsui, Stephen K W" sort="Tsui, Stephen K W" uniqKey="Tsui S" first="Stephen K. W." last="Tsui">Stephen K. W. Tsui</name>
<affiliation>
<nlm:aff id="af6-viruses-11-00423">School of Biomedical Sciences, Faculty of Medicine, The Chinese University of Hong Kong, Shatin, Hong Kong, China;
<email>jamie_slk@link.cuhk.edu.hk</email>
(J.S.L.K.);
<email>kwtsui@cuhk.edu.hk</email>
(S.K.W.T.)</nlm:aff>
</affiliation>
</author>
<author>
<name sortKey="Yuen, Kwok Yung" sort="Yuen, Kwok Yung" uniqKey="Yuen K" first="Kwok-Yung" last="Yuen">Kwok-Yung Yuen</name>
<affiliation>
<nlm:aff id="af1-viruses-11-00423">Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China;
<email>skplau@hku.hk</email>
(S.K.P.L.);
<email>antonwcp@connect.hku.hk</email>
(A.C.P.W);
<email>hkhluk@hku.hk</email>
(H.K.H.L.);
<email>shakeel87@gmail.com</email>
(S.S.A.);
<email>caijuice@hku.hk</email>
(J.-P.C.);
<email>pyrear@126.com</email>
(P.S.H.Z.);
<email>llteng@hku.hk</email>
(J.L.L.T.)</nlm:aff>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="af2-viruses-11-00423">State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong, China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong</wicri:regionArea>
<wicri:noRegion>Hong Kong</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="af3-viruses-11-00423">Carol Yu Centre for Infection, The University of Hong Kong, Pokfulam, Hong Kong, China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Carol Yu Centre for Infection, The University of Hong Kong, Pokfulam, Hong Kong</wicri:regionArea>
<wicri:noRegion>Hong Kong</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="af4-viruses-11-00423">Collaborative Innovation Centre for Diagnosis and Treatment of Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong, China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Collaborative Innovation Centre for Diagnosis and Treatment of Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong</wicri:regionArea>
<wicri:noRegion>Hong Kong</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Woo, Patrick C Y" sort="Woo, Patrick C Y" uniqKey="Woo P" first="Patrick C. Y." last="Woo">Patrick C. Y. Woo</name>
<affiliation>
<nlm:aff id="af1-viruses-11-00423">Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China;
<email>skplau@hku.hk</email>
(S.K.P.L.);
<email>antonwcp@connect.hku.hk</email>
(A.C.P.W);
<email>hkhluk@hku.hk</email>
(H.K.H.L.);
<email>shakeel87@gmail.com</email>
(S.S.A.);
<email>caijuice@hku.hk</email>
(J.-P.C.);
<email>pyrear@126.com</email>
(P.S.H.Z.);
<email>llteng@hku.hk</email>
(J.L.L.T.)</nlm:aff>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="af2-viruses-11-00423">State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong, China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong</wicri:regionArea>
<wicri:noRegion>Hong Kong</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="af3-viruses-11-00423">Carol Yu Centre for Infection, The University of Hong Kong, Pokfulam, Hong Kong, China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Carol Yu Centre for Infection, The University of Hong Kong, Pokfulam, Hong Kong</wicri:regionArea>
<wicri:noRegion>Hong Kong</wicri:noRegion>
</affiliation>
<affiliation wicri:level="1">
<nlm:aff id="af4-viruses-11-00423">Collaborative Innovation Centre for Diagnosis and Treatment of Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong, China</nlm:aff>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Collaborative Innovation Centre for Diagnosis and Treatment of Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong</wicri:regionArea>
<wicri:noRegion>Hong Kong</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Viruses</title>
<idno type="eISSN">1999-4915</idno>
<imprint>
<date when="2019">2019</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<p>While bats are increasingly recognized as a source of coronavirus epidemics, the diversity and emergence potential of bat coronaviruses remains to be fully understood. Among 1779 bat samples collected in China, diverse coronaviruses were detected in 32 samples from five different bat species by RT-PCR. Two novel alphacoronaviruses,
<italic>Rhinolophus sinicus</italic>
bat coronavirus HKU32 (Rs-BatCoV HKU32) and
<italic>Tylonycteris robustula</italic>
bat coronavirus HKU33 (Tr-BatCoV HKU33), were discovered from Chinese horseshoe bats in Hong Kong and greater bamboo bats in Guizhou Province, respectively. Genome analyses showed that Rs-BatCoV HKU32 is closely related to BatCoV HKU10 and related viruses from diverse bat families, whereas Tr-BatCoV HKU33 is closely related to BtNv-AlphaCoV and similar viruses exclusively from bats of
<italic>Vespertilionidae</italic>
family. The close relatedness of Rs-BatCoV HKU32 to BatCoV HKU10 which was also detected in Pomona roundleaf bats from the same country park suggests that these viruses may have the tendency of infecting genetically distant bat populations of close geographical proximity with subsequent genetic divergence. Moreover, the presence of SARSr-CoV ORF7a-like protein in Rs-BatCoV HKU32 suggests a common evolutionary origin of this accessory protein with SARS-CoV, also from Chinese horseshoe bats, an apparent reservoir for coronavirus epidemics. The emergence potential of Rs-BatCoV HKU32 should be explored.</p>
</div>
</front>
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<affiliations>
<list>
<country>
<li>République populaire de Chine</li>
</country>
</list>
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<name sortKey="Cai, Jian Piao" sort="Cai, Jian Piao" uniqKey="Cai J" first="Jian-Piao" last="Cai">Jian-Piao Cai</name>
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<name sortKey="Luk, Hayes K H" sort="Luk, Hayes K H" uniqKey="Luk H" first="Hayes K. H." last="Luk">Hayes K. H. Luk</name>
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</noCountry>
<country name="République populaire de Chine">
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<name sortKey="Woo, Patrick C Y" sort="Woo, Patrick C Y" uniqKey="Woo P" first="Patrick C. Y." last="Woo">Patrick C. Y. Woo</name>
<name sortKey="Woo, Patrick C Y" sort="Woo, Patrick C Y" uniqKey="Woo P" first="Patrick C. Y." last="Woo">Patrick C. Y. Woo</name>
<name sortKey="Yuen, Kwok Yung" sort="Yuen, Kwok Yung" uniqKey="Yuen K" first="Kwok-Yung" last="Yuen">Kwok-Yung Yuen</name>
<name sortKey="Yuen, Kwok Yung" sort="Yuen, Kwok Yung" uniqKey="Yuen K" first="Kwok-Yung" last="Yuen">Kwok-Yung Yuen</name>
<name sortKey="Yuen, Kwok Yung" sort="Yuen, Kwok Yung" uniqKey="Yuen K" first="Kwok-Yung" last="Yuen">Kwok-Yung Yuen</name>
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</record>

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